Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin guanine dinucleotide biosynthesis accessory protein mobb | SAMN05444679_12078 | Not Available | Negative | 5078488 - 5079033 | 20387.3 |
| threonine synthase | SAMN05444679_12079 | Not Available | Negative | 5079049 - 5080464 | 51925.8 |
| homoserine dehydrogenase | SAMN05444679_12080 | Not Available | Negative | 5080464 - 5081786 | 46489.5 |
| alanine-synthesizing transaminase | SAMN05444679_12081 | Not Available | Negative | 5081815 - 5083041 | 44982.2 |
| uncharacterized conserved protein, contains mth938-like domain | SAMN05444679_12082 | Not Available | Positive | 5083108 - 5083494 | 13912.6 |
| peroxiredoxin q/bcp | SAMN05444679_12083 | Not Available | Positive | 5083630 - 5084106 | 17536.5 |
| phoh-like atpase | SAMN05444679_12084 | Not Available | Positive | 5084298 - 5086046 | 63430.6 |
| eve domain-containing protein | SAMN05444679_12085 | Not Available | Positive | 5086123 - 5086572 | 16454.8 |
| predicted transcriptional regulator ydee, contains arac-type dna-binding domain | SAMN05444679_12086 | Not Available | Positive | 5086592 - 5087044 | 17116.9 |
| hth domain-containing protein | SAMN05444679_12087 | Not Available | Positive | 5087088 - 5087798 | 26448.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
