Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpb | SAMN05444679_12068 | Not Available | Negative | 5067685 - 5070306 | 95933.7 |
| acetyl esterase/lipase | SAMN05444679_12069 | Not Available | Negative | 5070378 - 5071274 | 32347.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12070 | Not Available | Negative | 5071279 - 5072259 | 33655.0 |
| hypothetical protein | SAMN05444679_12071 | Not Available | Negative | 5072270 - 5073184 | 34742.3 |
| transcriptional regulator, lysr family | SAMN05444679_12072 | Not Available | Positive | 5073298 - 5074191 | 32483.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12073 | Not Available | Positive | 5074286 - 5075284 | 34934.3 |
| molybdopterin synthase subunit moae | SAMN05444679_12074 | Not Available | Negative | 5075388 - 5075864 | 17605.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_12075 | Not Available | Positive | 5076117 - 5077007 | 31107.7 |
| molybdopterin synthase subunit moad | SAMN05444679_12076 | Not Available | Negative | 5076994 - 5077245 | 8722.39 |
| molybdopterin molybdotransferase | SAMN05444679_12077 | Not Available | Negative | 5077248 - 5078465 | 42510.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
