Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain-containing protein | SAMN05444679_1023 | Not Available | Positive | 474093 - 474764 | 25450.3 |
| hypothetical protein | SAMN05444679_1024 | Not Available | Negative | 475026 - 475172 | 5094.23 |
| fad/fmn-containing dehydrogenase | SAMN05444679_1025 | Not Available | Positive | 475244 - 476662 | 51072.0 |
| dna-binding transcriptional regulator, marr family | SAMN05444679_1026 | Not Available | Positive | 477512 - 478057 | 20080.5 |
| predicted acylesterase/phospholipase rssa, contains patatin domain | SAMN05444679_1027 | Not Available | Negative | 478532 - 480238 | 59963.5 |
| hypothetical protein | SAMN05444679_1028 | Not Available | Negative | 480235 - 480486 | 8598.78 |
| cyclic nucleotide-binding domain-containing protein | SAMN05444679_1029 | Not Available | Positive | 480561 - 482045 | 54634.9 |
| putative cardiolipin synthase | SAMN05444679_10210 | Not Available | Negative | 482082 - 483803 | 63057.7 |
| hamp domain-containing protein | SAMN05444679_10211 | Not Available | Positive | 483915 - 484475 | 19735.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10212 | Not Available | Negative | 484497 - 485459 | 33513.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
