Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate formate lyase activating enzyme | SAMN05444679_12058 | Not Available | Positive | 5059062 - 5060147 | 40301.0 |
| phospholipid-binding protein, pbp family | SAMN05444679_12059 | Not Available | Positive | 5060159 - 5060635 | 16866.1 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444679_12060 | Not Available | Negative | 5060639 - 5061976 | 45896.2 |
| protein of unknown function | SAMN05444679_12061 | Not Available | Negative | 5061976 - 5062689 | 25766.7 |
| trap transporter, dctm subunit | SAMN05444679_12062 | Not Available | Negative | 5062701 - 5064101 | 49204.3 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444679_12063 | Not Available | Negative | 5064098 - 5064706 | 21668.8 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05444679_12064 | Not Available | Negative | 5064706 - 5065782 | 37993.2 |
| hypothetical protein | SAMN05444679_12065 | Not Available | Negative | 5065852 - 5066244 | 14104.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_12066 | Not Available | Negative | 5066384 - 5067301 | 33602.0 |
| hypothetical protein | SAMN05444679_12067 | Not Available | Negative | 5067347 - 5067679 | 12063.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
