Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase | SAMN05444679_12048 | Not Available | Negative | 5050768 - 5051916 | 40396.4 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN05444679_12049 | Not Available | Negative | 5051913 - 5053361 | 49681.9 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN05444679_12050 | Not Available | Negative | 5053354 - 5053758 | 14445.6 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_12051 | Not Available | Positive | 5053885 - 5054718 | 30425.2 |
| amino acid abc transporter membrane protein 1, paat family | SAMN05444679_12052 | Not Available | Positive | 5054790 - 5055458 | 24759.8 |
| amino acid abc transporter membrane protein 2, paat family | SAMN05444679_12053 | Not Available | Positive | 5055458 - 5056147 | 25719.2 |
| amino acid abc transporter atp-binding protein, paat family | SAMN05444679_12054 | Not Available | Positive | 5056125 - 5056862 | 27043.1 |
| transcriptional regulator, gntr family | SAMN05444679_12055 | Not Available | Negative | 5056878 - 5057672 | 29073.9 |
| ribosome-associated protein | SAMN05444679_12056 | Not Available | Negative | 5057752 - 5058165 | 15195.4 |
| hypothetical protein | SAMN05444679_12057 | Not Available | Positive | 5058259 - 5059065 | 28537.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
