Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05444679_12038 | Not Available | Positive | 5040771 - 5041283 | 18915.6 |
| gst-like protein | SAMN05444679_12039 | Not Available | Positive | 5041300 - 5041974 | 25057.2 |
| hypothetical protein | SAMN05444679_12040 | Not Available | Positive | 5042085 - 5042543 | 17241.6 |
| hypothetical protein | SAMN05444679_12041 | Not Available | Negative | 5042565 - 5043317 | 25951.0 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_12042 | Not Available | Negative | 5043406 - 5044647 | 42670.8 |
| arac-type dna-binding protein | SAMN05444679_12043 | Not Available | Positive | 5044737 - 5045558 | 30254.6 |
| sulfate permease, sulp family | SAMN05444679_12044 | Not Available | Positive | 5045633 - 5047324 | 59402.9 |
| calcineurin-like phosphoesterase | SAMN05444679_12045 | Not Available | Positive | 5047321 - 5048103 | 28293.6 |
| dihydropyrimidinase | SAMN05444679_12046 | Not Available | Negative | 5048381 - 5049793 | 50905.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_12047 | Not Available | Negative | 5049820 - 5050755 | 33310.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
