Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | SAMN05444679_12027 | Not Available | Positive | 5031793 - 5032365 | 20772.6 |
| putative tricarboxylic transport membrane protein | SAMN05444679_12028 | Not Available | Positive | 5032387 - 5033913 | 53879.6 |
| sugar phosphate isomerase/epimerase | SAMN05444679_12029 | Not Available | Positive | 5033930 - 5034784 | 30264.5 |
| hypothetical protein | SAMN05444679_12030 | Not Available | Positive | 5034777 - 5036201 | 51515.6 |
| sugar phosphate isomerase/epimerase | SAMN05444679_12031 | Not Available | Positive | 5036236 - 5037114 | 31949.2 |
| winged helix dna-binding domain-containing protein | SAMN05444679_12032 | Not Available | Positive | 5037191 - 5037574 | 14322.3 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN05444679_12033 | Not Available | Positive | 5037618 - 5038223 | 22949.1 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05444679_12034 | Not Available | Positive | 5038220 - 5039128 | 33064.8 |
| transcriptional regulator, arsr family | SAMN05444679_12035 | Not Available | Negative | 5039557 - 5039913 | 12898.8 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444679_12036 | Not Available | Negative | 5039897 - 5040358 | 17479.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
