Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine efflux transporter rhta | SAMN05444679_12017 | Not Available | Positive | 5021086 - 5022012 | 32668.2 |
| swib/mdm2 domain-containing protein | SAMN05444679_12018 | Not Available | Positive | 5022196 - 5022612 | 14407.0 |
| acetolactate synthase-1/2/3 large subunit | SAMN05444679_12019 | Not Available | Negative | 5022674 - 5024398 | 61461.6 |
| transcriptional regulator, tetr family | SAMN05444679_12020 | Not Available | Positive | 5024492 - 5025139 | 24610.5 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12021 | Not Available | Positive | 5025238 - 5026215 | 33765.7 |
| predicted dehydrogenase | SAMN05444679_12022 | Not Available | Positive | 5026240 - 5027403 | 43551.2 |
| protein of unknown function | SAMN05444679_12023 | Not Available | Positive | 5027412 - 5028599 | 42690.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444679_12024 | Not Available | Positive | 5028626 - 5029648 | 37329.8 |
| dihydrodipicolinate synthetase family protein | SAMN05444679_12025 | Not Available | Positive | 5029651 - 5030718 | 38676.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_12026 | Not Available | Positive | 5030786 - 5031796 | 35375.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
