Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase beta subunit | SAMN05444679_1206 | Not Available | Negative | 5010423 - 5012861 | 88069.3 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05444679_1207 | Not Available | Negative | 5012883 - 5013959 | 39906.3 |
| large subunit ribosomal protein l20 | SAMN05444679_1208 | Not Available | Negative | 5014070 - 5014429 | 13388.7 |
| lsu ribosomal protein l35p | SAMN05444679_1209 | Not Available | Negative | 5014454 - 5014657 | 7447.43 |
| bacterial translation initiation factor 3 (bif-3) | SAMN05444679_12011 | Not Available | Negative | 5014805 - 5015341 | 19708.0 |
| threonyl-trna synthetase | SAMN05444679_12012 | Not Available | Negative | 5015516 - 5017423 | 72512.9 |
| quinol monooxygenase ygin | SAMN05444679_12013 | Not Available | Negative | 5017645 - 5017956 | 11152.5 |
| transcriptional regulator, arac family | SAMN05444679_12014 | Not Available | Positive | 5018071 - 5019033 | 34754.1 |
| isocitrate lyase | SAMN05444679_12015 | Not Available | Negative | 5019098 - 5020417 | 48479.3 |
| uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like family | SAMN05444679_12016 | Not Available | Negative | 5020634 - 5021053 | 14803.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
