Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system substrate-binding protein | SAMN05444679_119137 | Not Available | Negative | 5003824 - 5005077 | 45348.8 |
| hypothetical protein | SAMN05444679_119138 | Not Available | Positive | 5005342 - 5005563 | 8296.92 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_119139 | Not Available | Positive | 5005674 - 5006426 | 26403.7 |
| hypothetical protein | SAMN05444679_119140 | Not Available | Negative | 5006473 - 5006994 | 19290.4 |
| enoyl-(acyl carrier protein) reductase | SAMN05444679_119141 | Not Available | Negative | 5007242 - 5007463 | 7705.25 |
| hypothetical protein | SAMN05444679_1201 | Not Available | Positive | 5007464 - 5007563 | 3696.4 |
| hypothetical protein | SAMN05444679_1202 | Not Available | Positive | 5008013 - 5009152 | 42036.7 |
| Trna-pro | Not Available | Not Available | Positive | 5009427 - 5009503 | Not Available |
| dna-binding transcriptional regulator, merr family | SAMN05444679_1204 | Not Available | Negative | 5009530 - 5009991 | 18103.8 |
| integration host factor subunit alpha | SAMN05444679_1205 | Not Available | Negative | 5010055 - 5010426 | 13518.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
