Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate 1-decarboxylase | SAMN05444679_119127 | Not Available | Negative | 4994461 - 4994847 | 14070.8 |
| hypothetical protein | SAMN05444679_119128 | Not Available | Negative | 4995007 - 4997115 | 74506.3 |
| transcriptional regulator, iclr family | SAMN05444679_119129 | Not Available | Negative | 4997158 - 4997940 | 27634.8 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444679_119130 | Not Available | Positive | 4998080 - 4999096 | 37018.7 |
| 3-dehydroquinate dehydratase | SAMN05444679_119131 | Not Available | Positive | 4999111 - 4999554 | 16015.4 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444679_119132 | Not Available | Positive | 4999560 - 5000144 | 21045.2 |
| trap transporter, dctm subunit | SAMN05444679_119133 | Not Available | Positive | 5000141 - 5001421 | 44865.4 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444679_119134 | Not Available | Positive | 5001441 - 5002445 | 35752.3 |
| cupin superfamily protein | SAMN05444679_119135 | Not Available | Negative | 5002488 - 5003471 | 36749.6 |
| hypothetical protein | SAMN05444679_119136 | Not Available | Positive | 5003621 - 5003800 | 6020.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
