Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05444679_119117 | Not Available | Negative | 4984913 - 4985635 | 26383.6 |
| hypothetical protein | SAMN05444679_119118 | Not Available | Positive | 4985637 - 4986404 | 27034.2 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05444679_119119 | Not Available | Negative | 4986415 - 4987206 | 28333.0 |
| transcriptional regulator, arac family | SAMN05444679_119120 | Not Available | Positive | 4987311 - 4988240 | 35168.9 |
| 5-hydroxyisourate hydrolase | SAMN05444679_119121 | Not Available | Negative | 4988244 - 4988600 | 12967.6 |
| hypothetical protein | SAMN05444679_119122 | Not Available | Negative | 4988651 - 4989991 | 48726.8 |
| biotin synthase | SAMN05444679_119123 | Not Available | Negative | 4989988 - 4990998 | 36856.0 |
| dethiobiotin synthetase | SAMN05444679_119124 | Not Available | Negative | 4991112 - 4991816 | 24538.5 |
| 8-amino-7-oxononanoate synthase | SAMN05444679_119125 | Not Available | Negative | 4991828 - 4993030 | 42352.2 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMN05444679_119126 | Not Available | Negative | 4992996 - 4994378 | 50661.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
