Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN05444679_119107 | Not Available | Positive | 4970240 - 4971481 | 44566.3 |
| hypothetical protein | SAMN05444679_119108 | Not Available | Positive | 4971515 - 4972054 | 18396.9 |
| multidrug efflux pump subunit acra (membrane-fusion protein) | SAMN05444679_119109 | Not Available | Positive | 4972051 - 4973154 | 37936.4 |
| heavy-metal exporter, hme family | SAMN05444679_119110 | Not Available | Positive | 4973167 - 4976286 | 112009.0 |
| hypothetical protein | SAMN05444679_119111 | Not Available | Positive | 4976323 - 4976706 | 13197.0 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN05444679_119112 | Not Available | Negative | 4976693 - 4979869 | 114254.0 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN05444679_119113 | Not Available | Negative | 4979866 - 4981377 | 53465.3 |
| outer membrane protein tolc | SAMN05444679_119114 | Not Available | Negative | 4981374 - 4982606 | 43816.9 |
| hypothetical protein | SAMN05444679_119115 | Not Available | Negative | 4982683 - 4983111 | 15257.0 |
| methyl-accepting chemotaxis protein | SAMN05444679_119116 | Not Available | Positive | 4983199 - 4984896 | 59672.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
