Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN05444679_101478 | Not Available | Negative | 463919 - 464536 | 22939.2 |
| membrane-bound lytic murein transglycosylase b | SAMN05444679_101479 | Not Available | Negative | 464539 - 465588 | 38290.0 |
| transglutaminase-like superfamily protein | SAMN05444679_101480 | Not Available | Negative | 465642 - 467633 | 73232.2 |
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN05444679_101481 | Not Available | Negative | 467627 - 468601 | 35603.3 |
| moxr-like atpase | SAMN05444679_101482 | Not Available | Negative | 468598 - 469518 | 32798.8 |
| acetoin utilization deacetylase acuc | SAMN05444679_101483 | Not Available | Positive | 469594 - 470547 | 35071.7 |
| mechanosensitive ion channel | SAMN05444679_101484 | Not Available | Positive | 470561 - 471841 | 46282.2 |
| hypothetical protein | SAMN05444679_101485 | Not Available | Positive | 471981 - 472075 | 3383.26 |
| hypothetical protein | SAMN05444679_1021 | Not Available | Negative | 472405 - 472827 | 15612.8 |
| transposase | SAMN05444679_1022 | Not Available | Positive | 473344 - 474126 | 29865.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
