Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltooligosyl trehalose hydrolase | SAMN05444679_11997 | Not Available | Positive | 4957508 - 4959349 | 67656.8 |
| maltooligosyl trehalose synthase | SAMN05444679_11998 | Not Available | Positive | 4959342 - 4964486 | 189892.0 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_11999 | Not Available | Negative | 4964489 - 4965679 | 40414.9 |
| glycerol uptake facilitator (major intrinsic protein family) | SAMN05444679_119100 | Not Available | Negative | 4965676 - 4966383 | 24198.8 |
| protein tyrosine phosphatase | SAMN05444679_119101 | Not Available | Negative | 4966388 - 4966882 | 17700.9 |
| hypothetical protein | SAMN05444679_119102 | Not Available | Negative | 4966897 - 4967334 | 15855.5 |
| transcriptional regulator, arsr family | SAMN05444679_119103 | Not Available | Negative | 4967345 - 4967668 | 11496.8 |
| arsenate reductase | SAMN05444679_119104 | Not Available | Positive | 4967698 - 4968144 | 16428.8 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05444679_119105 | Not Available | Positive | 4968272 - 4969063 | 29254.1 |
| protein of unknown function | SAMN05444679_119106 | Not Available | Positive | 4969774 - 4970133 | 12908.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
