Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_11987 | Not Available | Negative | 4943027 - 4943803 | 27629.1 |
| sugar lactone lactonase yvre | SAMN05444679_11988 | Not Available | Positive | 4943925 - 4944836 | 32978.6 |
| arac-type dna-binding protein | SAMN05444679_11989 | Not Available | Negative | 4944844 - 4945890 | 38224.2 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05444679_11990 | Not Available | Positive | 4945956 - 4946861 | 31655.8 |
| hypothetical protein | SAMN05444679_11991 | Not Available | Negative | 4946883 - 4947143 | 9541.42 |
| 1,4-alpha-glucan branching enzyme | SAMN05444679_11992 | Not Available | Positive | 4947325 - 4949223 | 71768.4 |
| alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase | SAMN05444679_11993 | Not Available | Positive | 4949216 - 4951258 | 76736.8 |
| maltose alpha-d-glucosyltransferase/ alpha-amylase | SAMN05444679_11994 | Not Available | Positive | 4951271 - 4954612 | 126199.0 |
| conserved tm helix | SAMN05444679_11995 | Not Available | Positive | 4954636 - 4955343 | 25864.3 |
| glycogen operon protein | SAMN05444679_11996 | Not Available | Positive | 4955340 - 4957511 | 81873.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
