Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atp-binding cassette transporter | SAMN05444679_11967 | Not Available | Positive | 4916225 - 4917991 | 65315.5 |
| preq(0) biosynthesis protein quec | SAMN05444679_11968 | Not Available | Negative | 4917970 - 4918671 | 26037.1 |
| protein of unknown function | SAMN05444679_11969 | Not Available | Negative | 4918903 - 4919367 | 16926.3 |
| atp-binding cassette, subfamily b | SAMN05444679_11970 | Not Available | Negative | 4919364 - 4921679 | 84314.1 |
| cyanophycin synthetase | SAMN05444679_11971 | Not Available | Positive | 4921708 - 4924008 | 81361.5 |
| cyanophycin synthetase | SAMN05444679_11972 | Not Available | Positive | 4924054 - 4926621 | 91000.3 |
| hypothetical protein | SAMN05444679_11973 | Not Available | Positive | 4926778 - 4927266 | 16663.3 |
| hypothetical protein | SAMN05444679_11974 | Not Available | Positive | 4927365 - 4927616 | 9673.68 |
| inorganic triphosphatase ygif, contains cyth and chad domains | SAMN05444679_11975 | Not Available | Positive | 4927627 - 4929141 | 56165.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase/2-keto-3-deoxy-l-arabinonate dehydratase | SAMN05444679_11976 | Not Available | Negative | 4929151 - 4930080 | 33946.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
