Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein j | SAMN05444679_11957 | Not Available | Positive | 4905145 - 4905810 | 24204.9 |
| general secretion pathway protein k | SAMN05444679_11958 | Not Available | Positive | 4905807 - 4906853 | 36912.1 |
| general secretion pathway protein l | SAMN05444679_11959 | Not Available | Positive | 4906987 - 4908195 | 42226.1 |
| general secretion pathway protein m | SAMN05444679_11960 | Not Available | Positive | 4908192 - 4908758 | 20217.3 |
| general secretion pathway protein n | SAMN05444679_11961 | Not Available | Positive | 4908773 - 4909570 | 27802.2 |
| general secretion pathway protein d | SAMN05444679_11962 | Not Available | Positive | 4909573 - 4911885 | 80667.2 |
| type ii secretion system protein e (gspe) | SAMN05444679_11963 | Not Available | Positive | 4911896 - 4913317 | 51211.7 |
| hypothetical protein | SAMN05444679_11964 | Not Available | Negative | 4913321 - 4913893 | 20724.8 |
| general secretion pathway protein f | SAMN05444679_11965 | Not Available | Positive | 4913989 - 4915221 | 43622.0 |
| 5'-nucleotidase | SAMN05444679_11966 | Not Available | Positive | 4915228 - 4916127 | 33120.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
