Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydrolase of the had superfamily | SAMN05444679_11937 | Not Available | Negative | 4883361 - 4884023 | 24710.7 |
| iron(iii) transport system atp-binding protein | SAMN05444679_11938 | Not Available | Negative | 4884020 - 4885066 | 37077.9 |
| iron(iii) transport system permease protein | SAMN05444679_11939 | Not Available | Negative | 4885081 - 4887306 | 78525.6 |
| iron(iii) transport system substrate-binding protein | SAMN05444679_11940 | Not Available | Negative | 4887308 - 4888318 | 36522.8 |
| glucose-6-phosphate 1-dehydrogenase | SAMN05444679_11941 | Not Available | Positive | 4888463 - 4889932 | 54886.5 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_11942 | Not Available | Negative | 4890045 - 4891049 | 37034.1 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_11943 | Not Available | Negative | 4891046 - 4892038 | 35816.7 |
| peptide/nickel transport system permease protein | SAMN05444679_11944 | Not Available | Negative | 4892058 - 4892969 | 32730.5 |
| peptide/nickel transport system substrate-binding protein | SAMN05444679_11945 | Not Available | Negative | 4893098 - 4894672 | 57821.0 |
| hippurate hydrolase | SAMN05444679_11946 | Not Available | Negative | 4894699 - 4895952 | 44247.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
