Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444679_11917 | Not Available | Positive | 4862509 - 4863384 | 31697.4 |
| dna-binding protein hu-beta | SAMN05444679_11918 | Not Available | Negative | 4863466 - 4863822 | 12287.2 |
| peptide/nickel transport system substrate-binding protein | SAMN05444679_11919 | Not Available | Negative | 4863923 - 4865494 | 56755.7 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_11920 | Not Available | Negative | 4865535 - 4867184 | 60221.8 |
| peptide/nickel transport system permease protein | SAMN05444679_11921 | Not Available | Negative | 4867181 - 4868011 | 29619.8 |
| peptide/nickel transport system permease protein | SAMN05444679_11922 | Not Available | Negative | 4868008 - 4868952 | 33805.7 |
| hypothetical protein | SAMN05444679_11923 | Not Available | Negative | 4868975 - 4869871 | 33080.4 |
| isopenicillin-n n-acyltransferase like protein | SAMN05444679_11924 | Not Available | Negative | 4869916 - 4871049 | 41447.4 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_11925 | Not Available | Positive | 4871205 - 4872122 | 33596.1 |
| hypothetical protein | SAMN05444679_11926 | Not Available | Positive | 4872328 - 4872648 | 11500.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
