Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | SAMN05444679_1197 | Not Available | Positive | 4852846 - 4854000 | 41386.3 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_1198 | Not Available | Positive | 4854049 - 4855035 | 34609.4 |
| rraa famliy | SAMN05444679_1199 | Not Available | Positive | 4855046 - 4855732 | 24042.2 |
| transcriptional regulator, lysr family | SAMN05444679_11910 | Not Available | Negative | 4855710 - 4856672 | 36399.9 |
| pectate lyase | SAMN05444679_11911 | Not Available | Negative | 4856722 - 4858314 | 55952.9 |
| transcriptional regulator, lysr family | SAMN05444679_11912 | Not Available | Negative | 4858454 - 4859389 | 34042.9 |
| hypothetical protein | SAMN05444679_11913 | Not Available | Negative | 4859479 - 4860198 | 26059.8 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05444679_11914 | Not Available | Negative | 4860471 - 4861046 | 20487.5 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_11915 | Not Available | Negative | 4861060 - 4861968 | 32387.0 |
| hypothetical protein | SAMN05444679_11916 | Not Available | Negative | 4861965 - 4862408 | 16320.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
