Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase | SAMN05444679_101468 | Not Available | Negative | 453267 - 454760 | 53565.0 |
| transcriptional regulator, deor family | SAMN05444679_101469 | Not Available | Negative | 454762 - 455541 | 28474.3 |
| homodimeric glycerol 3-phosphate dehydrogenase (quinone) | SAMN05444679_101470 | Not Available | Positive | 455635 - 457296 | 60513.9 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444679_101471 | Not Available | Positive | 457287 - 458363 | 38102.1 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05444679_101472 | Not Available | Positive | 458365 - 459435 | 39129.5 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05444679_101473 | Not Available | Positive | 459432 - 460322 | 33042.0 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05444679_101474 | Not Available | Positive | 460319 - 461131 | 30708.9 |
| predicted small integral membrane protein | SAMN05444679_101475 | Not Available | Positive | 461144 - 461452 | 11697.8 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05444679_101476 | Not Available | Positive | 461541 - 463271 | 63990.9 |
| histidine phosphatase superfamily (branch 1) | SAMN05444679_101477 | Not Available | Positive | 463439 - 463918 | 16922.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
