Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SAMN05444679_118172 | Not Available | Positive | 4844897 - 4845259 | 13062.8 |
| hypothetical protein | SAMN05444679_118173 | Not Available | Positive | 4845276 - 4845737 | 17184.0 |
| aldehyde dehydrogenase (acceptor) | SAMN05444679_118174 | Not Available | Positive | 4845734 - 4847242 | 54096.0 |
| hypothetical protein | SAMN05444679_118175 | Not Available | Positive | 4847247 - 4847359 | 4176.1 |
| pin domain-containing protein | SAMN05444679_1191 | Not Available | Negative | 4847360 - 4847497 | 4732.65 |
| lipase (class 2) | SAMN05444679_1192 | Not Available | Positive | 4847715 - 4848710 | 35630.9 |
| phospholipid-binding protein, pbp family | SAMN05444679_1193 | Not Available | Positive | 4848776 - 4849345 | 19709.6 |
| arac-type dna-binding protein | SAMN05444679_1194 | Not Available | Negative | 4849371 - 4850384 | 38202.4 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_1195 | Not Available | Negative | 4850431 - 4851612 | 40735.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_1196 | Not Available | Negative | 4851695 - 4852690 | 36848.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
