Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN05444679_118162 | Not Available | Positive | 4832059 - 4833018 | 33658.0 |
| protein of unknown function | SAMN05444679_118163 | Not Available | Negative | 4832994 - 4833428 | 16426.4 |
| aaa atpase domain-containing protein | SAMN05444679_118164 | Not Available | Positive | 4833499 - 4836669 | 113715.0 |
| peroxiredoxin | SAMN05444679_118165 | Not Available | Positive | 4836692 - 4837342 | 23652.9 |
| transcriptional regulator, lysr family | SAMN05444679_118166 | Not Available | Positive | 4837391 - 4838341 | 34873.1 |
| hypothetical protein | SAMN05444679_118167 | Not Available | Positive | 4838616 - 4840226 | 58671.9 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05444679_118168 | Not Available | Positive | 4840265 - 4841254 | 36256.9 |
| hypothetical protein | SAMN05444679_118169 | Not Available | Positive | 4841447 - 4841959 | 18979.6 |
| hypothetical protein | SAMN05444679_118170 | Not Available | Positive | 4842099 - 4843106 | 37760.5 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05444679_118171 | Not Available | Positive | 4843158 - 4844900 | 61717.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
