Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter secretion inner membrane protein tamb | SAMN05444679_118152 | Not Available | Negative | 4819731 - 4823786 | 142132.0 |
| autotransporter secretion outer membrane protein tama | SAMN05444679_118153 | Not Available | Negative | 4823788 - 4825644 | 67522.7 |
| proline 4-hydroxylase (includes rps23 pro-64 3,4-dihydroxylase tpa1), contains sm-20 domain | SAMN05444679_118154 | Not Available | Negative | 4825746 - 4826666 | 34296.3 |
| hypothetical protein | SAMN05444679_118155 | Not Available | Negative | 4826821 - 4828008 | 46122.8 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444679_118156 | Not Available | Negative | 4828015 - 4828623 | 22619.1 |
| hypothetical protein | SAMN05444679_118157 | Not Available | Negative | 4828626 - 4828871 | 8378.41 |
| moxr-like atpase | SAMN05444679_118158 | Not Available | Negative | 4828868 - 4829710 | 32019.9 |
| cytochrome c553 | SAMN05444679_118159 | Not Available | Positive | 4829860 - 4830543 | 24254.0 |
| protocatechuate 3,4-dioxygenase alpha subunit | SAMN05444679_118160 | Not Available | Negative | 4830633 - 4831238 | 21857.7 |
| protocatechuate 3,4-dioxygenase, beta subunit | SAMN05444679_118161 | Not Available | Negative | 4831256 - 4831957 | 26442.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
