Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein, msmeg_0568 family | SAMN05444679_118142 | Not Available | Positive | 4811636 - 4812706 | 37880.6 |
| putative n-acetyltransferase, msmeg_0567 n-terminal domain family | SAMN05444679_118143 | Not Available | Positive | 4812709 - 4813269 | 20480.5 |
| hypothetical protein | SAMN05444679_118144 | Not Available | Positive | 4813266 - 4814267 | 35351.6 |
| glycosyltransferase, msmeg_0565 family | SAMN05444679_118145 | Not Available | Positive | 4814245 - 4815432 | 43191.0 |
| msmeg_0570 family protein | SAMN05444679_118146 | Not Available | Positive | 4815446 - 4815730 | 10639.7 |
| putative flavoprotein involved in k+ transport | SAMN05444679_118147 | Not Available | Positive | 4815763 - 4817046 | 46882.6 |
| bifunctional nmn adenylyltransferase/nudix hydrolase | SAMN05444679_118148 | Not Available | Negative | 4817059 - 4818129 | 39359.8 |
| hypothetical protein | SAMN05444679_118149 | Not Available | Positive | 4818314 - 4818604 | 10589.2 |
| hypothetical protein | SAMN05444679_118150 | Not Available | Negative | 4818638 - 4818856 | 7686.22 |
| Trna-arg | Not Available | Not Available | Positive | 4819632 - 4819706 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
