Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photo-lyase | SAMN05444679_118132 | Not Available | Negative | 4802202 - 4803713 | 56471.1 |
| putative transcriptional regulator | SAMN05444679_118133 | Not Available | Positive | 4803733 - 4804311 | 20840.8 |
| putative holliday junction resolvase | SAMN05444679_118134 | Not Available | Positive | 4804323 - 4804745 | 15196.8 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN05444679_118135 | Not Available | Positive | 4804742 - 4805236 | 17637.3 |
| aspartate carbamoyltransferase | SAMN05444679_118136 | Not Available | Positive | 4805236 - 4806198 | 34884.5 |
| dihydroorotase | SAMN05444679_118137 | Not Available | Positive | 4806195 - 4807466 | 44255.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05444679_118138 | Not Available | Positive | 4807485 - 4808228 | 27492.2 |
| transcriptional regulator, gntr family | SAMN05444679_118139 | Not Available | Negative | 4808383 - 4809804 | 51207.7 |
| msmeg_0572 family protein | SAMN05444679_118140 | Not Available | Positive | 4810121 - 4810603 | 17595.4 |
| aliphatic nitrilase | SAMN05444679_118141 | Not Available | Positive | 4810618 - 4811673 | 38009.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
