Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase | SAMN05444679_118122 | Not Available | Positive | 4787905 - 4789476 | 55832.8 |
| hypothetical protein | SAMN05444679_118123 | Not Available | Negative | 4789495 - 4789689 | 7006.52 |
| hypothetical protein | SAMN05444679_118124 | Not Available | Negative | 4789686 - 4789964 | 10273.0 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05444679_118125 | Not Available | Negative | 4789961 - 4791256 | 45571.9 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN05444679_118126 | Not Available | Negative | 4791256 - 4792215 | 34394.1 |
| twitching motility two-component system response regulator pilg | SAMN05444679_118127 | Not Available | Positive | 4792573 - 4792971 | 14670.7 |
| twitching motility two-component system response regulator pilh | SAMN05444679_118128 | Not Available | Positive | 4792971 - 4793336 | 13596.6 |
| twitching motility protein pili | SAMN05444679_118129 | Not Available | Positive | 4793355 - 4793888 | 18885.3 |
| twitching motility protein pilj | SAMN05444679_118130 | Not Available | Positive | 4793929 - 4796259 | 82322.3 |
| chemosensory pili system protein chpa (sensor histidine kinase/response regulator) | SAMN05444679_118131 | Not Available | Positive | 4796276 - 4802182 | 211640.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
