Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | SAMN05444679_118112 | Not Available | Negative | 4778670 - 4779449 | 27613.4 |
| predicted metalloprotease, contains c-terminal pdz domain | SAMN05444679_118113 | Not Available | Negative | 4779484 - 4781277 | 66591.4 |
| thiol:disulfide interchange protein dsbc | SAMN05444679_118114 | Not Available | Negative | 4781277 - 4781987 | 26274.4 |
| ubiquinone biosynthesis hydroxylase, ubih/ubif/visc/coq6 family | SAMN05444679_118115 | Not Available | Negative | 4782011 - 4783120 | 40262.2 |
| hypothetical protein | SAMN05444679_118116 | Not Available | Positive | 4783198 - 4784079 | 32511.0 |
| hypothetical protein | SAMN05444679_118117 | Not Available | Positive | 4784136 - 4785227 | 39462.4 |
| glutathione s-transferase | SAMN05444679_118118 | Not Available | Positive | 4785250 - 4785924 | 24959.5 |
| membrane protein yqaa, snare-associated domain | SAMN05444679_118119 | Not Available | Negative | 4785938 - 4786408 | 17212.4 |
| pp_04692 | SAMN05444679_118120 | Not Available | Positive | 4786577 - 4787632 | Not Available |
| dna-binding protein fis | SAMN05444679_118121 | Not Available | Positive | 4787662 - 4787898 | 9101.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
