Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction dna helicase subunit ruvb | SAMN05444679_118102 | Not Available | Positive | 4769979 - 4771034 | 38538.6 |
| cation diffusion facilitator family transporter | SAMN05444679_118103 | Not Available | Positive | 4771047 - 4771994 | 34280.1 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN05444679_118104 | Not Available | Positive | 4772083 - 4772961 | 33561.9 |
| udp-n-acetylglucosamine:lps n-acetylglucosamine transferase | SAMN05444679_118105 | Not Available | Positive | 4772958 - 4774169 | 44374.4 |
| hypothetical protein | SAMN05444679_118106 | Not Available | Negative | 4774163 - 4774363 | 7246.63 |
| protein of unknown function | SAMN05444679_118107 | Not Available | Negative | 4774742 - 4774924 | 6851.03 |
| Trna-met | Not Available | Not Available | Positive | 4775039 - 4775115 | Not Available |
| von willebrand factor type a domain-containing protein | SAMN05444679_118109 | Not Available | Negative | 4775147 - 4776688 | 55255.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444679_118110 | Not Available | Positive | 4776825 - 4777493 | 24606.2 |
| hypothetical protein | SAMN05444679_118111 | Not Available | Positive | 4777490 - 4778662 | 39979.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
