Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l13p | SAMN05444679_11882 | Not Available | Positive | 4753885 - 4754316 | 15717.2 |
| ssu ribosomal protein s9p | SAMN05444679_11883 | Not Available | Positive | 4754329 - 4754721 | 14367.3 |
| iron-sulfur cluster insertion protein | SAMN05444679_11884 | Not Available | Positive | 4754840 - 4755205 | 12937.1 |
| anhydro-n-acetylmuramic acid kinase | SAMN05444679_11885 | Not Available | Negative | 4755272 - 4756387 | 38360.5 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05444679_11886 | Not Available | Negative | 4756407 - 4757756 | 48095.3 |
| tyrosyl-trna synthetase | SAMN05444679_11887 | Not Available | Positive | 4757916 - 4759148 | 44808.7 |
| hypothetical protein | SAMN05444679_11888 | Not Available | Negative | 4759194 - 4759397 | 7279.6 |
| fecr family protein | SAMN05444679_11889 | Not Available | Negative | 4759499 - 4759963 | 16026.5 |
| cation diffusion facilitator family transporter | SAMN05444679_11890 | Not Available | Positive | 4760057 - 4761013 | 33855.1 |
| d-tyrosyl-trna(tyr) deacylase | SAMN05444679_11891 | Not Available | Positive | 4761010 - 4761453 | 15599.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
