Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444679_101458 | Not Available | Negative | 439474 - 439932 | 15903.3 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN05444679_101459 | Not Available | Negative | 439929 - 440942 | 37029.0 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN05444679_101460 | Not Available | Negative | 440945 - 443641 | 97698.4 |
| uncharacterized conserved protein, duf2126 family | SAMN05444679_101461 | Not Available | Negative | 443795 - 447298 | 130327.0 |
| hypothetical protein | SAMN05444679_101462 | Not Available | Negative | 447361 - 447540 | 6688.11 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN05444679_101463 | Not Available | Positive | 447950 - 449458 | 56294.6 |
| uncharacterized conserved protein, alpha-e superfamily | SAMN05444679_101464 | Not Available | Positive | 449477 - 450433 | 36741.5 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05444679_101465 | Not Available | Positive | 451282 - 452109 | 29618.4 |
| abc-type uncharacterized transport system, auxiliary component | SAMN05444679_101466 | Not Available | Positive | 452106 - 452714 | 22331.2 |
| cytochrome b561 | SAMN05444679_101467 | Not Available | Negative | 452711 - 453262 | 20949.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
