Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11871 | Not Available | Negative | 4743761 - 4744549 | 28360.5 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN05444679_11872 | Not Available | Negative | 4744549 - 4746177 | 60227.4 |
| hypothetical protein | SAMN05444679_11873 | Not Available | Negative | 4746247 - 4746864 | 21389.1 |
| adenosylhomocysteinase | SAMN05444679_11875 | Not Available | Positive | 4747097 - 4748524 | 51752.0 |
| 23s rrna (cytidine1920-2'-o)/16s rrna (cytidine1409-2'-o)-methyltransferase | SAMN05444679_11876 | Not Available | Positive | 4748534 - 4749331 | 28168.7 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN05444679_11877 | Not Available | Positive | 4749273 - 4750142 | 31609.9 |
| rare lipoprotein a | SAMN05444679_11878 | Not Available | Positive | 4750139 - 4750816 | 23731.4 |
| 23s rrna (adenine2030-n6)-methyltransferase | SAMN05444679_11879 | Not Available | Negative | 4750837 - 4751736 | 32463.9 |
| hypothetical protein | SAMN05444679_11880 | Not Available | Positive | 4751815 - 4752471 | 21692.8 |
| trypsin-like peptidase domain-containing protein | SAMN05444679_11881 | Not Available | Positive | 4752468 - 4753712 | 44351.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
