Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN05444679_11861 | Not Available | Positive | 4730587 - 4731075 | 17270.8 |
| hypothetical protein | SAMN05444679_11862 | Not Available | Positive | 4731126 - 4731278 | 5622.56 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05444679_11863 | Not Available | Positive | 4731275 - 4731916 | 23447.0 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_11864 | Not Available | Positive | 4732062 - 4733756 | 60591.7 |
| hypothetical protein | SAMN05444679_11865 | Not Available | Positive | 4733848 - 4734006 | 5382.61 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_11866 | Not Available | Negative | 4734013 - 4735125 | 38604.7 |
| excinuclease abc subunit a | SAMN05444679_11867 | Not Available | Positive | 4735296 - 4741202 | 213725.0 |
| acetoin utilization deacetylase acuc | SAMN05444679_11868 | Not Available | Positive | 4741202 - 4742248 | 37484.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_11869 | Not Available | Positive | 4742353 - 4743309 | 34181.5 |
| thioredoxin | SAMN05444679_11870 | Not Available | Positive | 4743317 - 4743754 | 15844.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
