Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05444679_11851 | Not Available | Negative | 4718750 - 4719808 | 39530.8 |
| isovaleryl-coa dehydrogenase | SAMN05444679_11852 | Not Available | Positive | 4719939 - 4721111 | 42342.6 |
| fatty-acyl-coa synthase | SAMN05444679_11853 | Not Available | Positive | 4721123 - 4722790 | 61598.4 |
| 3-methylcrotonyl-coa carboxylase beta subunit | SAMN05444679_11854 | Not Available | Positive | 4722787 - 4724472 | 59999.8 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN05444679_11855 | Not Available | Positive | 4724486 - 4724995 | 19067.6 |
| methylglutaconyl-coa hydratase | SAMN05444679_11856 | Not Available | Positive | 4725138 - 4725935 | 28312.0 |
| protein of unknown function | SAMN05444679_11857 | Not Available | Positive | 4725932 - 4726603 | 23405.9 |
| 3-methylcrotonyl-coa carboxylase alpha subunit | SAMN05444679_11858 | Not Available | Positive | 4726596 - 4728590 | 71698.6 |
| glyoxylate/hydroxypyruvate reductase a | SAMN05444679_11859 | Not Available | Positive | 4728716 - 4729645 | 33905.7 |
| hydroxymethylglutaryl-coa lyase | SAMN05444679_11860 | Not Available | Positive | 4729667 - 4730587 | 33015.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
