Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11840 | Not Available | Positive | 4709363 - 4710493 | 40150.8 |
| hypothetical protein | SAMN05444679_11841 | Not Available | Positive | 4710620 - 4710751 | 4744.08 |
| mandelamide amidase | SAMN05444679_11842 | Not Available | Positive | 4710833 - 4712353 | 51290.9 |
| transcriptional regulator, luxr family | SAMN05444679_11843 | Not Available | Negative | 4712354 - 4713088 | 27905.3 |
| sec-c motif-containing protein | SAMN05444679_11844 | Not Available | Positive | 4713200 - 4713637 | 16530.3 |
| protein of unknown function | SAMN05444679_11845 | Not Available | Positive | 4713829 - 4714671 | 30488.9 |
| membrane protein deda, snare-associated domain | SAMN05444679_11846 | Not Available | Positive | 4714675 - 4715652 | 33615.3 |
| hydroxymethylpyrimidine synthase | SAMN05444679_11848 | Not Available | Positive | 4715863 - 4717743 | 69129.2 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05444679_11849 | Not Available | Positive | 4717780 - 4718463 | 23868.6 |
| hypothetical protein | SAMN05444679_11850 | Not Available | Negative | 4718480 - 4718677 | 7020.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
