Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN05444679_11830 | Not Available | Negative | 4698908 - 4699549 | 23295.4 |
| trna pseudouridine32 synthase / 23s rrna pseudouridine746 synthase | SAMN05444679_11831 | Not Available | Negative | 4699599 - 4700513 | 34449.9 |
| serine/threonine protein kinase | SAMN05444679_11832 | Not Available | Negative | 4700527 - 4701855 | 46814.3 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_11833 | Not Available | Negative | 4701852 - 4702913 | 39287.2 |
| dna-binding transcriptional regulator, merr family | SAMN05444679_11834 | Not Available | Positive | 4703012 - 4703407 | 14839.0 |
| carbonic anhydrase | SAMN05444679_11835 | Not Available | Positive | 4703449 - 4704156 | 26304.4 |
| isocitrate dehydrogenase kinase/phosphatase | SAMN05444679_11836 | Not Available | Positive | 4704161 - 4705972 | 70390.2 |
| acetyl-coa c-acetyltransferase | SAMN05444679_11837 | Not Available | Positive | 4706138 - 4707322 | 40780.5 |
| hypothetical protein | SAMN05444679_11838 | Not Available | Positive | 4707436 - 4707951 | 18879.3 |
| glutamate carboxypeptidase | SAMN05444679_11839 | Not Available | Positive | 4708093 - 4709340 | 43946.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
