Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sagb-type dehydrogenase domain-containing protein | SAMN05444679_11820 | Not Available | Positive | 4687062 - 4688786 | 64035.1 |
| transcriptional regulator, tetr family | SAMN05444679_11821 | Not Available | Negative | 4688783 - 4689463 | 25208.6 |
| glutamin-(asparagin-)ase | SAMN05444679_11822 | Not Available | Positive | 4689648 - 4690718 | 37831.5 |
| glycyl-trna synthetase alpha chain | SAMN05444679_11823 | Not Available | Positive | 4690958 - 4691863 | 34409.7 |
| glycyl-trna synthetase beta chain | SAMN05444679_11824 | Not Available | Positive | 4691867 - 4694017 | 76494.3 |
| d-glycero-d-manno-heptose 1,7-bisphosphate phosphatase | SAMN05444679_11825 | Not Available | Positive | 4694028 - 4694609 | 20851.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN05444679_11826 | Not Available | Positive | 4694609 - 4695364 | 28268.3 |
| hypothetical protein | SAMN05444679_11827 | Not Available | Positive | 4695374 - 4696264 | 33005.7 |
| gluconate 5-dehydrogenase/2-deoxy-d-gluconate 3-dehydrogenase | SAMN05444679_11828 | Not Available | Negative | 4696277 - 4697047 | 27018.4 |
| signal transduction histidine kinase | SAMN05444679_11829 | Not Available | Negative | 4697104 - 4698915 | 65742.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
