Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apolipoprotein n-acyltransferase | SAMN05444679_11810 | Not Available | Positive | 4678206 - 4679780 | 56043.3 |
| fad/fmn-containing dehydrogenase | SAMN05444679_11811 | Not Available | Negative | 4679740 - 4681098 | 49389.4 |
| nitt/taut family transport system permease protein | SAMN05444679_11812 | Not Available | Negative | 4681106 - 4681912 | 28937.6 |
| nitt/taut family transport system atp-binding protein | SAMN05444679_11813 | Not Available | Negative | 4681909 - 4682751 | 30588.6 |
| nitt/taut family transport system substrate-binding protein | SAMN05444679_11814 | Not Available | Negative | 4682759 - 4683754 | 36044.4 |
| creatinine amidohydrolase | SAMN05444679_11815 | Not Available | Negative | 4683822 - 4684688 | 31456.6 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN05444679_11816 | Not Available | Negative | 4684721 - 4685308 | 22787.7 |
| peroxiredoxin | SAMN05444679_11817 | Not Available | Positive | 4685485 - 4686147 | 23730.5 |
| conserved hypothetical protein | SAMN05444679_11818 | Not Available | Positive | 4686166 - 4686816 | 24269.2 |
| hypothetical protein | SAMN05444679_11819 | Not Available | Positive | 4686836 - 4687036 | 6983.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
