Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_117183 | Not Available | Negative | 4669076 - 4669201 | 4419.37 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_1181 | Not Available | Negative | 4669321 - 4670244 | 33457.8 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444679_1182 | Not Available | Negative | 4670241 - 4671932 | 61561.6 |
| alpha/beta hydrolase family protein | SAMN05444679_1183 | Not Available | Positive | 4672035 - 4672919 | 32963.9 |
| phenylalanine 4-hydroxylase | SAMN05444679_1184 | Not Available | Negative | 4672938 - 4673807 | 32729.9 |
| cyclohexadienyl dehydratase | SAMN05444679_1185 | Not Available | Negative | 4673827 - 4674630 | 29558.4 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05444679_1186 | Not Available | Negative | 4674658 - 4675785 | 41745.6 |
| transcriptional regulator, asnc family | SAMN05444679_1187 | Not Available | Positive | 4675951 - 4676424 | 17807.6 |
| protein n-acetyltransferase, rimj/riml family | SAMN05444679_1188 | Not Available | Positive | 4676533 - 4677258 | 26672.1 |
| magnesium and cobalt transporter | SAMN05444679_1189 | Not Available | Positive | 4677331 - 4678209 | 32321.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
