Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arsr family | SAMN05444679_117173 | Not Available | Positive | 4656831 - 4657403 | 21962.7 |
| cyd operon protein ybgt | SAMN05444679_117174 | Not Available | Negative | 4657501 - 4657623 | 4789.88 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN05444679_117175 | Not Available | Negative | 4657644 - 4658798 | 42241.4 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN05444679_117176 | Not Available | Negative | 4658815 - 4660431 | 58959.5 |
| atp-binding cassette, subfamily c, cydc | SAMN05444679_117177 | Not Available | Negative | 4660469 - 4662160 | 58997.9 |
| atp-binding cassette, subfamily c, cydd | SAMN05444679_117178 | Not Available | Negative | 4662157 - 4663839 | 58475.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444679_117179 | Not Available | Positive | 4663928 - 4665061 | 41843.4 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05444679_117180 | Not Available | Negative | 4665074 - 4666213 | 40793.6 |
| nitronate monooxygenase | SAMN05444679_117181 | Not Available | Negative | 4666203 - 4667165 | 33465.1 |
| hypothetical protein | SAMN05444679_117182 | Not Available | Negative | 4667194 - 4668993 | 63677.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
