Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructokinase | SAMN05444679_117163 | Not Available | Positive | 4648140 - 4649066 | 32722.0 |
| putative toxin-antitoxin system toxin component, pin family | SAMN05444679_117164 | Not Available | Negative | 4649072 - 4649293 | 7755.52 |
| mfs transporter, ppp family, 3-phenylpropionic acid transporter | SAMN05444679_117165 | Not Available | Negative | 4649430 - 4650623 | 42666.8 |
| chorismate synthase | SAMN05444679_117166 | Not Available | Negative | 4650623 - 4651750 | 39836.2 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05444679_117167 | Not Available | Negative | 4651758 - 4653320 | 53261.4 |
| uncharacterized conserved protein | SAMN05444679_117168 | Not Available | Negative | 4653376 - 4653735 | 13071.4 |
| uncharacterized conserved protein | SAMN05444679_117169 | Not Available | Negative | 4653732 - 4654094 | 13195.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444679_117170 | Not Available | Negative | 4654184 - 4655446 | 45670.5 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05444679_117171 | Not Available | Negative | 4655446 - 4655913 | 17576.8 |
| cupin domain-containing protein | SAMN05444679_117172 | Not Available | Positive | 4656351 - 4656773 | 15937.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
