Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_117153 | Not Available | Negative | 4636540 - 4637415 | 30625.2 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_117154 | Not Available | Negative | 4637423 - 4638589 | 40852.1 |
| sugar phosphate isomerase/epimerase | SAMN05444679_117155 | Not Available | Negative | 4638586 - 4639467 | 33010.4 |
| shikimate dehydrogenase | SAMN05444679_117156 | Not Available | Negative | 4639488 - 4640411 | 32613.2 |
| transcriptional regulator, iclr family | SAMN05444679_117157 | Not Available | Positive | 4640572 - 4641357 | 28936.1 |
| major facilitator superfamily protein | SAMN05444679_117158 | Not Available | Negative | 4641465 - 4642874 | 50753.4 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444679_117159 | Not Available | Positive | 4643204 - 4644448 | 44936.0 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444679_117160 | Not Available | Positive | 4644441 - 4645988 | 54965.9 |
| ribose transport system permease protein | SAMN05444679_117161 | Not Available | Positive | 4646017 - 4647030 | 34784.7 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444679_117162 | Not Available | Positive | 4647071 - 4648009 | 32833.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
