Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylisocitrate lyase, pep mutase family | SAMN05444679_117143 | Not Available | Negative | 4628091 - 4628930 | 29606.4 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN05444679_117144 | Not Available | Negative | 4629032 - 4629706 | 24670.2 |
| 3-oxoadipate enol-lactonase | SAMN05444679_117145 | Not Available | Negative | 4629723 - 4630487 | 27043.2 |
| 4-carboxymuconolactone decarboxylase | SAMN05444679_117146 | Not Available | Negative | 4630484 - 4630897 | 15380.6 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05444679_117147 | Not Available | Negative | 4630894 - 4632105 | 42455.3 |
| shikimate dehydrogenase | SAMN05444679_117148 | Not Available | Negative | 4632119 - 4632955 | 29087.2 |
| predicted dehydrogenase | SAMN05444679_117149 | Not Available | Negative | 4632952 - 4633995 | 36736.1 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444679_117150 | Not Available | Negative | 4634008 - 4634763 | 27121.4 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_117151 | Not Available | Negative | 4634766 - 4635551 | 28137.5 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_117152 | Not Available | Negative | 4635548 - 4636543 | 35207.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
