Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, sigma subunit, ecf family | SAMN05444679_117133 | Not Available | Positive | 4616645 - 4617928 | 46377.1 |
| flagellar basal body-associated protein flil | SAMN05444679_117134 | Not Available | Negative | 4617936 - 4618811 | 31567.7 |
| nitt/taut family transport system atp-binding protein | SAMN05444679_117135 | Not Available | Negative | 4618904 - 4620205 | 47058.9 |
| nitt/taut family transport system permease protein | SAMN05444679_117136 | Not Available | Negative | 4620225 - 4621952 | 64312.7 |
| selenocysteine lyase/cysteine desulfurase | SAMN05444679_117137 | Not Available | Negative | 4622016 - 4623317 | 47872.5 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_117138 | Not Available | Positive | 4623418 - 4624329 | 33891.6 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN05444679_117139 | Not Available | Negative | 4624355 - 4625248 | 31957.5 |
| 4-carboxymuconolactone decarboxylase | SAMN05444679_117140 | Not Available | Negative | 4625363 - 4625956 | 21359.8 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_117141 | Not Available | Negative | 4625973 - 4627163 | 39761.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_117142 | Not Available | Positive | 4627230 - 4628096 | 31200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
