Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_117122 | Not Available | Positive | 4607503 - 4608039 | 19784.0 |
| hypothetical protein | SAMN05444679_117123 | Not Available | Positive | 4608172 - 4609080 | 34567.7 |
| aminomethyltransferase | SAMN05444679_117125 | Not Available | Positive | 4609345 - 4610550 | 42656.8 |
| glycine cleavage system h protein | SAMN05444679_117126 | Not Available | Positive | 4610575 - 4610949 | 13281.4 |
| glycine dehydrogenase | SAMN05444679_117127 | Not Available | Positive | 4610963 - 4613857 | 103513.0 |
| uncharacterized conserved protein | SAMN05444679_117128 | Not Available | Positive | 4614009 - 4614428 | 16020.3 |
| uncharacterized conserved protein | SAMN05444679_117129 | Not Available | Positive | 4614460 - 4614900 | 16383.7 |
| uncharacterized conserved protein | SAMN05444679_117130 | Not Available | Positive | 4614948 - 4615643 | 24539.1 |
| set domain-containing protein | SAMN05444679_117131 | Not Available | Positive | 4615702 - 4616145 | 16178.5 |
| uncharacterized conserved protein | SAMN05444679_117132 | Not Available | Positive | 4616233 - 4616640 | 14920.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
