Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama-like transporter family protein | SAMN05444679_117112 | Not Available | Negative | 4598323 - 4599144 | 28932.9 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_117113 | Not Available | Negative | 4599222 - 4600004 | 27368.0 |
| electron-transferring-flavoprotein dehydrogenase | SAMN05444679_117114 | Not Available | Positive | 4600126 - 4601820 | 61909.9 |
| hypothetical protein | SAMN05444679_117115 | Not Available | Positive | 4601934 - 4602419 | 16997.2 |
| protein of unknown function | SAMN05444679_117116 | Not Available | Negative | 4602431 - 4602991 | 19097.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444679_117117 | Not Available | Positive | 4603025 - 4603627 | 22420.8 |
| anti-sigma-k factor rska | SAMN05444679_117118 | Not Available | Positive | 4603624 - 4604355 | 25653.2 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05444679_117119 | Not Available | Positive | 4604569 - 4605543 | 35340.6 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05444679_117120 | Not Available | Positive | 4605620 - 4606132 | 19243.8 |
| trap transporter, dctm subunit | SAMN05444679_117121 | Not Available | Positive | 4606129 - 4607421 | 46019.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
