Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine:proton symporter, eat family | SAMN05444679_117102 | Not Available | Positive | 4587484 - 4588890 | 49850.7 |
| ethanolamine ammonia-lyase heavy chain | SAMN05444679_117103 | Not Available | Positive | 4588898 - 4590292 | 49989.9 |
| ethanolamine ammonia-lyase light chain | SAMN05444679_117104 | Not Available | Positive | 4590289 - 4591077 | 27961.5 |
| haloacid dehalogenase-like hydrolase | SAMN05444679_117105 | Not Available | Positive | 4591144 - 4592433 | 47011.9 |
| uncharacterized peroxidase-related enzyme | SAMN05444679_117106 | Not Available | Positive | 4592483 - 4593061 | 21870.4 |
| lipid a ethanolaminephosphotransferase | SAMN05444679_117107 | Not Available | Negative | 4593069 - 4594829 | 63783.3 |
| membrane-associated enzyme, pap2 (acid phosphatase) superfamily | SAMN05444679_117108 | Not Available | Negative | 4594876 - 4595583 | 25695.7 |
| two-component system, ompr family, response regulator | SAMN05444679_117109 | Not Available | Positive | 4595673 - 4596350 | 24872.1 |
| two-component system, ompr family, sensor kinase | SAMN05444679_117110 | Not Available | Positive | 4596347 - 4597714 | 50350.0 |
| acyl-coa thioester hydrolase | SAMN05444679_117111 | Not Available | Negative | 4597907 - 4598326 | 15783.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
