Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444679_11792 | Not Available | Positive | 4577355 - 4578383 | 37619.1 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_11793 | Not Available | Positive | 4578390 - 4579646 | 45540.5 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_11794 | Not Available | Positive | 4579664 - 4580485 | 29330.5 |
| mfs transporter, aahs family, 4-hydroxybenzoate transporter | SAMN05444679_11795 | Not Available | Negative | 4580531 - 4581886 | 48130.7 |
| gamma-resorcylate decarboxylase | SAMN05444679_11796 | Not Available | Negative | 4581883 - 4582881 | 38255.5 |
| resorcinol 4-hydroxylase oxygenase subunit | SAMN05444679_11797 | Not Available | Negative | 4582891 - 4584126 | 43398.4 |
| resorcinol 4-hydroxylase reductase subunit | SAMN05444679_11798 | Not Available | Negative | 4584197 - 4584706 | 18392.1 |
| transcriptional regulator, lysr family | SAMN05444679_11799 | Not Available | Negative | 4584864 - 4585796 | 33891.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN05444679_117100 | Not Available | Negative | 4585820 - 4586188 | 12925.4 |
| transcriptional regulator, arac family | SAMN05444679_117101 | Not Available | Negative | 4586290 - 4587327 | 38281.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
