Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11782 | Not Available | Positive | 4565223 - 4566848 | 58546.6 |
| alkylated dna repair protein (dna oxidative demethylase) | SAMN05444679_11783 | Not Available | Negative | 4566845 - 4567480 | 22878.5 |
| hypothetical protein | SAMN05444679_11784 | Not Available | Negative | 4567593 - 4568276 | 25860.0 |
| arac family transcriptional regulator, regulatory protein of adaptative response / methylated-dna-[protein]-cysteine methyltransferase | SAMN05444679_11785 | Not Available | Negative | 4568273 - 4569355 | 38699.9 |
| glucans biosynthesis protein | SAMN05444679_11786 | Not Available | Positive | 4569544 - 4571097 | 57993.6 |
| predicted transcriptional regulator yheo, contains pas and dna-binding hth domains | SAMN05444679_11787 | Not Available | Positive | 4571148 - 4571768 | 22653.2 |
| uncharacterized conserved protein | SAMN05444679_11788 | Not Available | Positive | 4571846 - 4573195 | 48469.4 |
| transcriptional regulator, gntr family | SAMN05444679_11789 | Not Available | Negative | 4573299 - 4574732 | 52506.5 |
| 4-aminobutyrate aminotransferase apoenzyme | SAMN05444679_11790 | Not Available | Positive | 4574893 - 4576185 | 45503.7 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444679_11791 | Not Available | Positive | 4576209 - 4577303 | 39753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
